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3 <title>CLARITY: Standard Generic Function STORE-CONSENSUS-SEQUENCE</title>
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44 <strong><i>CLARITY: Standard Generic Function STORE-CONSENSUS-SEQUENCE</title></i></strong>
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62
63 <h1><i>Generic function</i> <strong>STORE-CONSENSUS-SEQUENCE</strong></h1>
64
65 <h2>Package:</h2>
66
67 <p><code>CLARITY</code></p>
68
69 <h2>Syntax:</h2>
70
71 <p>
72 <pre>
73 <b>store-consensus-sequence</b> <i>cl-handle node-id term-name sequence</i>
74 </pre>
75 </p>
76
77 <h3>Arguments and Values:</h3>
78
79 <p><i><code>cl-handle</code></i>---a <i>clarity-handle</i>
80 <p><i><code>node-id</code></i>---an <i>integer</i>
81 <p><i><code>term-name</code></i>---a <i>string</i>
82 <p><i><code>sequence</code></i>---a <i>string</i>
83
84
85 <h2>Description:</h2>
86
87 <p>The generic function store-consensus-sequence stores a consensus sequence and its identifying information
88 in the database. It takes four parameters, clarity-handle, which identifies the clarity database; node-id, the
89 integer id of the tree node the consensus sequence belongs to; term name, and sequence which is a gantt chart
90 sequence.</p>
91
92
93 <h3><a name="known_methods">Known Methods</a>:</h3>
94
95 <p>
96 <ul>
97 <li>
98 <p>
99 <pre>
100 <b>store-consensus-sequence</b> (<i>cl-handle</i> clarity-handle) (<i>node-id</i> integer) (<i>term-name</i> string)
101 (<i>sequence</i> string)
102 </pre>
103 </p>
104
105 </li>
106 </ul>
107 </p>
108
109 <h2>Examples:</h2>
110
111 <p><pre>cl-prompt: (clarity:<b>store-consensus-sequence</b> cl-handle 7 "apoptosis" "UDDIDN")</pre></p>
112
113 <h2>Affected By:</h2>
114
115 <p>None.</p>
116
117 <h2>Exceptional Situations:</h2>
118
119 <p>None.</p>
120
121 <h2><a href="ganttify.html">GANTTIFY</a><br>
122 <a href="build-consensus.html">BUILD-CONSENSUS</a><br>
123 <a href="get-consensus-terms.html">GET-CONSENSUS-TERMS</a></h2>
124
125 <p>None.</p>
126
127 <h2>Notes:</h2>
128
129 <p>None.</p>
130
131
132
133 <hr>
134
135
136 <h1>News</h1>
137
138 <p>News in chronological order, most recent on top.
139 </p>
140
141 <ul>
142 <li><strong>2006-07-26 </strong><br>
143 Completed description.
144 </li>
145
146 </ul>
147
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151 &copy; 2006, Samantha Kleinberg, all rights reserved.
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