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3 <title>CLARITY: Standard Generic Function GET-DATA-TERMS</title>
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44 <strong><i>CLARITY: Standard Generic Function GET-DATA-TERMS</title></i></strong>
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62
63 <h1><i>Generic function</i> <strong>GET-DATA-TERMS</strong></h1>
64
65 <h2>Package:</h2>
66
67 <p><code>CLARITY</code></p>
68
69 <h2>Syntax:</h2>
70
71 <p>
72 <pre>
73 <b>get-data-terms</b> <i>cl-handle node-id term-name sequence</i>
74 </pre>
75 </p>
76
77 <h3>Arguments and Values:</h3>
78
79 <p><i><code>cl-handle</code></i>---a <i>clarity-handle</i>
80 <p><i><code>data-id</code></i>---an <i>integer</i>
81
82
83 <h2>Description:</h2>
84
85 <p>The generic function get-data-terms gets the corresponding consensus terms from the database for a
86 node in the tree. It takes two parameters, clarity-handle, which identifies the clarity database; and data-id, the
87 integer id of the timecourse dataset for which to find the terms. It returns a list of the ontology terms that are in the
88 consensus.</p>
89
90
91 <h3><a name="known_methods">Known Methods</a>:</h3>
92
93 <p>
94 <ul>
95 <li>
96 <p>
97 <pre>
98 <b>get-data-terms</b> (<i>cl-handle</i> clarity-handle) (<i>data-id</i> integer)
99 </pre>
100 </p>
101
102 </li>
103 </ul>
104 </p>
105
106 <h2>Examples:</h2>
107
108 <p><pre>cl-prompt: (clarity:<b>get-data-terms</b> cl-handle 9)
109 cl-prompt: '("Apoptosis" "M phase of mitotic cell cycle" "pathogenesis")</pre></p>
110
111 <h2>Affected By:</h2>
112
113 <p>None.</p>
114
115 <h2>Exceptional Situations:</h2>
116
117 <p>None.</p>
118
119 <h2>None.</h2>
120
121 <p>None.</p>
122
123 <h2>Notes:</h2>
124
125 <p>None.</p>
126
127
128
129 <hr>
130
131
132 <h1>News</h1>
133
134 <p>News in chronological order, most recent on top.
135 </p>
136
137 <ul>
138 <li><strong>2006-07-29 </strong><br>
139 Completed description.
140 </li>
141
142 </ul>
143
144
145
146 <div class="copyright">
147 &copy; 2006, Samantha Kleinberg, all rights reserved.
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