projects/mirror/clsr.git
4 years agoremove test change. master
Cyrus Harmon [Sat, 13 Jun 2009 16:18:22 +0000] 
remove test change.

5 years agoMerge branch 'master' of git+ssh://cyrusharmon.org/pub/git/clsr
Cyrus Harmon [Sat, 6 Sep 2008 18:55:52 +0000] 
Merge branch 'master' of git+ssh://cyrusharmon.org/pub/git/clsr

5 years agodepend on cxml instead of xmls now.
Cyrus Harmon [Tue, 8 Jul 2008 18:10:31 +0000] 
depend on cxml instead of xmls now.

6 years agowhat does this do?
Cyrus Harmon [Sun, 10 Feb 2008 18:59:15 +0000] 
what does this do?

6 years agoclsr 0.1.11 origin
sly [Sun, 3 Feb 2008 18:12:00 +0000] 
clsr 0.1.11
 * remove uffi dependency.
 * use the ch-asdf auto-load facility to load libcslr (and therefore libR).

6 years agoclsr 0.1.10
sly [Sun, 23 Dec 2007 23:02:52 +0000] 
clsr 0.1.10
 * renamed test/*.cl -> test/*.lisp

6 years agoclsr 0.1.9
sly [Sun, 23 Dec 2007 22:58:10 +0000] 
clsr 0.1.9
 * removed defpackage.cl
 * added some basic usage summary
 * clsr-test no longer defines clsr-test-system and old
   asdf cruft removed
 * export r-cmd

6 years agoclsr 0.1.8
sly [Sun, 23 Dec 2007 21:38:09 +0000] 
clsr 0.1.8

 * remove asdf:oos 'asdf:load-op gcc-xml-ffi as we don't need this
   anymore

 * call Rf_initialize_R with "--no-save" argument so we don't die on
   startup anymore

6 years agoclsr 0.1.7
sly [Thu, 15 Nov 2007 09:12:51 +0000] 
clsr 0.1.7

 * added df-row

 * use intsxp-element-or-factor instead of intsxp-element for intsxps
   in *r-vector-sexp-element-conversion-hash*

6 years agoclsr 0.1.6
sly [Mon, 5 Nov 2007 23:47:18 +0000] 
clsr 0.1.6
 * added the .lisp files

6 years agoclsr 0.1.5
sly [Mon, 5 Nov 2007 23:45:42 +0000] 
clsr 0.1.5
 * added clsr-gen to split out the gcc-xml-ffi stuff from the rest of clsr
 * removed .cl files
 * added .cvsignore
 * added clsr-init.lisp so that clsr-init is automatically called

6 years agoclsr 0.1.4
sly [Mon, 5 Nov 2007 18:32:02 +0000] 
clsr 0.1.4
 * fixed 0-indexing error in initialization
 * reworked documentation stuff
 * getting ready to send to DTL

7 years agoclsr 0.1.3
sly [Sun, 21 Jan 2007 02:43:22 +0000] 
clsr 0.1.3
 * fix asdf to work with gcc-xml-ffi properly
 * some changes to lisp.R that are so old I have no idea what they do
 * remove some unnecessary clsr:: prefixes
 * define-r-callback no longer conses a list
 * add string-vector-to-strsxp
 * retool vector-to-sexp
 * fix data-fram class and make-data-frame
 * add df-ref function
 * messing with tests

7 years ago* checkpointing before I go and break some stuff
sly [Tue, 16 May 2006 00:19:52 +0000] 
* checkpointing before I go and break some stuff

8 years ago * added tinaa docs
sly [Sat, 8 Apr 2006 08:04:58 +0000] 
 * added tinaa docs
 * added version.lisp-expr stuff

8 years ago * bump version number
sly [Wed, 5 Apr 2006 19:11:00 +0000] 
 * bump version number
 * list dependencies in README

8 years agochecking in changes to send a tarball to AJ Rosinni
sly [Fri, 3 Mar 2006 06:08:50 +0000] 
checking in changes to send a tarball to AJ Rosinni

8 years agoadd some make-lisp-xxx-ref-lambda tests
sly [Thu, 26 Jan 2006 19:52:56 +0000] 
add some make-lisp-xxx-ref-lambda tests

8 years agoadd a few exports :object-registry, :register-object, :unregister-id
sly [Thu, 26 Jan 2006 19:52:30 +0000] 
add a few exports :object-registry, :register-object, :unregister-id

8 years agoadd load-clsr-r-source-files function
sly [Thu, 26 Jan 2006 19:51:52 +0000] 
add load-clsr-r-source-files function

8 years agoadd clsr-objects.cl
sly [Thu, 26 Jan 2006 19:51:08 +0000] 
add clsr-objects.cl

8 years agoremove *r-lib-directory* parameter
sly [Tue, 24 Jan 2006 22:15:05 +0000] 
remove *r-lib-directory* parameter

8 years agolatest batch of CLSR changes. still trying to figure out how
sly [Fri, 6 Jan 2006 23:57:54 +0000] 
latest batch of CLSR changes. still trying to figure out how
to bridge R objects to lisp and vice versa...

8 years ago* adding some minimal error checking to the callback mult test.
sly [Thu, 1 Dec 2005 15:23:32 +0000] 
* adding some minimal error checking to the callback mult test.
* fix misplaced comma in constructing the arguments to External

8 years agomoved clsr-init up before loading tests.
sly [Thu, 1 Dec 2005 02:04:18 +0000] 
moved clsr-init up before loading tests.

8 years agomore fun with element-wise vector multiplies. now accepts arbitrary
sly [Thu, 1 Dec 2005 02:03:44 +0000] 
more fun with element-wise vector multiplies. now accepts arbitrary
number of vectors.

8 years agoelement-wise vector multiply test
sly [Wed, 30 Nov 2005 23:50:12 +0000] 
element-wise vector multiply test

8 years agor-sxp-class -> r-sxp-proxy-class
sly [Wed, 30 Nov 2005 21:12:11 +0000] 
r-sxp-class -> r-sxp-proxy-class

8 years agofirst callbacks working
sly [Wed, 30 Nov 2005 21:03:42 +0000] 
first callbacks working

8 years agomoved r-error into clsr.cl
sly [Wed, 30 Nov 2005 20:53:42 +0000] 
moved r-error into clsr.cl
first stab at working callbacks!!!

8 years agoremoved outdated file.
sly [Wed, 30 Nov 2005 00:57:41 +0000] 
removed outdated file.

8 years agoremoved dup test
sly [Fri, 18 Nov 2005 22:15:16 +0000] 
removed dup test

8 years ago* fixed putenv to use a c-string not a foreign string
sly [Fri, 18 Nov 2005 22:15:02 +0000] 
* fixed putenv to use a c-string not a foreign string
* proper 64-bit -1 for R_CStackLimit
* block floating point exceptions when going into the R
  initialization code. we might need to do something similar down in
  the tryeval stuff.

8 years agointeger -> sb-alien:int in sb-alien to get a 32-bit type instead of a 64-bit
sly [Fri, 18 Nov 2005 22:13:19 +0000] 
integer -> sb-alien:int in sb-alien to get a 32-bit type instead of a 64-bit
type on x86-64.

8 years agodirectory changes for x86-64 and x86 (x86 is untested)
sly [Fri, 18 Nov 2005 22:12:03 +0000] 
directory changes for x86-64 and x86 (x86 is untested)

8 years agoadded copyright file
sly [Thu, 17 Nov 2005 23:09:03 +0000] 
added copyright file

8 years agomore tests. this time with some basic bioc stuff.
sly [Thu, 17 Nov 2005 18:16:16 +0000] 
more tests. this time with some basic bioc stuff.

8 years ago* Cleaning up sexp-conversion functions
sly [Wed, 16 Nov 2005 18:49:08 +0000] 
* Cleaning up sexp-conversion functions
* Generally making things work better
* Added a hack to work around the stack checking in R 2.3
* Added initial data-frame class for converting data-frames

8 years agomore fixes to get the dso building properly
sly [Fri, 28 Oct 2005 23:05:04 +0000] 
more fixes to get the dso building properly

8 years agomaking clsr work under the new ch-asdf asdf regime
sly [Fri, 28 Oct 2005 22:38:15 +0000] 
making clsr work under the new ch-asdf asdf regime

8 years ago... use full absolute path for -I includes in gccxml
sly [Fri, 30 Sep 2005 18:52:29 +0000] 
... use full absolute path for -I includes in gccxml
... don't set USE_RINTERNALS or whatever to 1

8 years agofixing dependencies
sly [Tue, 27 Sep 2005 07:17:21 +0000] 
fixing dependencies

8 years agomoved things around again.
sly [Sat, 24 Sep 2005 19:03:30 +0000] 
moved things around again.
the source for gccxml is now in gccxml-src.
the source for the c-library (dummy at this point)
   is in c-src
header for c-library is in include
updated asd accordingly.

8 years agoinitial env stuff
sly [Sat, 24 Sep 2005 18:31:58 +0000] 
initial env stuff

8 years agoknow properly compiles the clsr C code into a .so and puts in the right place.
sly [Sat, 24 Sep 2005 18:31:36 +0000] 
know properly compiles the clsr C code into a .so and puts in the right place.

8 years agolook for the clsr library in the new place.
sly [Sat, 24 Sep 2005 18:31:11 +0000] 
look for the clsr library in the new place.
remove some cruft.

8 years agouse new type declarations and new complex number conversion routines
sly [Sat, 24 Sep 2005 18:30:33 +0000] 
use new type declarations and new complex number conversion routines

8 years agoadded lots of documentation and initial pass at dealing with ENVSXPs
sly [Sat, 24 Sep 2005 18:29:52 +0000] 
added lots of documentation and initial pass at dealing with ENVSXPs

8 years agoAdded r-sexp and r-complex type declarations
sly [Sat, 24 Sep 2005 18:29:23 +0000] 
Added r-sexp and r-complex type declarations

8 years agoremoving the autotools stuff
sly [Sat, 24 Sep 2005 18:28:26 +0000] 
removing the autotools stuff

8 years agoAdded ChangeLog
sly [Fri, 23 Sep 2005 23:50:03 +0000] 
Added ChangeLog

8 years agoremoving this file as stuff has been moved elsewhere.
sly [Fri, 23 Sep 2005 23:49:30 +0000] 
removing this file as stuff has been moved elsewhere.

8 years agoforgot to add this file.
sly [Fri, 23 Sep 2005 23:48:33 +0000] 
forgot to add this file.
moved all the sxp conversion stuff over here.

8 years agoLots of goodies.
sly [Fri, 23 Sep 2005 23:46:28 +0000] 
Lots of goodies.
Restructured files a bit to make things a little easier to find.
with-r-call now encapsulates the parsing and evaling of R commands.
Now use with-r-call in the tests.
Started work on fast matrix conversion routines.

8 years agocheckpoint matrix conversion routines.
sly [Fri, 23 Sep 2005 21:30:36 +0000] 
checkpoint matrix conversion routines.

8 years agocheckpoint the working tryEval stuff before I go break it some more.
sly [Fri, 23 Sep 2005 21:30:15 +0000] 
checkpoint the working tryEval stuff before I go break it some more.

8 years agocommitting before I add in the tryEval stuff.
sly [Thu, 22 Sep 2005 23:09:15 +0000] 
committing before I add in the tryEval stuff.

8 years agokeep hardcoded paths in only one place
sly [Sat, 17 Sep 2005 06:28:59 +0000] 
keep hardcoded paths in only one place

8 years agoadding clsr files
sly [Mon, 12 Sep 2005 17:04:28 +0000] 
adding clsr files